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| Registros recuperados: 31 | |
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| Albouy, Camille; Lasram, Frida Ben Rais; Velez, Laure; Guilhaumon, François; Meynard, Christine N.; Boyer, Séverine; Benestan, Laura; Mouquet, Nicolas; Douzery, Emmanuel; Aznar, Roland; Troussellier, Marc; Somot, Samuel; Leprieur, Fabien; Le Loc'H, François; Mouillot, David. |
| The FishMed database provides traits, phylogeny, current and projected species distribution of Mediterranean fishes, and associated sea surface temperature (SST) from the regional oceanic model NEMOMED8. Data for the current geographical distributions of 635 Mediterranean fish species were compiled from a published expert knowledge atlas of fishes of the northern Atlantic and the Mediterranean (FNAM) edited between 1984 and 1986 and from an updated exotic fish species list. Two future sets of projected species distributions were obtained for the middle and end of the 21st century by using an ensemble forecasting approach for 288 coastal Mediterranean fish species based on SST according to the IPPC/SRES A2 scenario implemented with the Mediterranean... |
| Tipo: Text |
Palavras-chave: Climate change; Coastal fishes; Functional diversity; Mediterranean fish species; Mediterranean Sea; NEMOMED8; Phylogenetic diversity; Species distribution models; Taxonomic diversity. |
| Ano: 2015 |
URL: https://archimer.ifremer.fr/doc/00371/48216/48341.pdf |
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| Muller, Alexandre; Poitrimol, Camille; Nunes, Flavia; Boye, Aurelien; Curd, Amelia; Desroy, Nicolas; Firth, Louise B; Bush, Laura; Davies, Andrew J; Lima, Fernando P; Marzloff, Martin; Meneghesso, Claudia; Seabra, Rui; Dubois, Stanislas. |
| Reef-building species are recognized as having an important ecological role and as generally enhancing the diversity of benthic organisms in marine habitats. However, although these ecosystem engineers have a facilitating role for some species, they may exclude or compete with others. The honeycomb worm Sabellaria alveolata (Linnaeus, 1767) is an important foundation species, commonly found from northwest Ireland to northern Mauritania, whose reef structures increase the physical complexity of the marine benthos, supporting high levels of biodiversity. Local patterns and regional differences in taxonomic and functional diversity were examined in honeycomb worm reefs from 10 sites along the northeastern Atlantic to explore variation in diversity across... |
| Tipo: Text |
Palavras-chave: Biodiversity; Taxonomic diversity; Functional diversity; Ecosystem engineer; Reef; Turnover. |
| Ano: 2021 |
URL: https://archimer.ifremer.fr/doc/00693/80506/83709.pdf |
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| Legras, Gaëlle; Loiseau, Nicolas; Gaertner, Jean-claude; Poggiale, J-c.; Gaertner-mazouni, N.. |
| The impact of the variation of the number of functional traits on functional diversity assessment is still poorly known. Although the covariation between these two parameters may be desirable in some situations (e.g. if adding functional traits provides relevant new functional information), it may also result from mathematical artefacts and lead to misinterpretation of the results obtained. Here, we have tested the behaviour of a set of nine indices widely used for assessing the three main components of functional diversity (i.e. functional richness, evenness and divergence), according to the variation in the number of functional traits. We found that the number of functional traits may strongly impact the values of most of the indices considered, whatever... |
| Tipo: Text |
Palavras-chave: Functional traits; Dissimilarity metric; Functional diversity; Index sensitivity; Trend analysis. |
| Ano: 2020 |
URL: https://archimer.ifremer.fr/doc/00503/61438/65561.pdf |
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| Chust, Guillem; Vogt, Meike; Benedetti, Fabio; Nakov, Teofil; Villeger, Sebastien; Aubert, Anais; Vallina, Sergio M.; Righetti, Damiano; Not, Fabrice; Biard, Tristan; Bittner, Lucie; Benoiston, Anne-sophie; Guidi, Lionel; Villarino, Ernesto; Gaborit, Charlie; Cornils, Astrid; Buttay, Lucie; Irisson, Jean-olivier; Chiarello, Marlene; Vallim, Alessandra L.; Blanco-bercial, Leocadio; Basconi, Laura; Guilhaumon, Francois; Ayata, Sakina-dorothee. |
| With global climate change altering marine ecosystems, research on plankton ecology is likely to navigate uncharted seas. Yet, a staggering wealth of new plankton observations, integrated with recent advances in marine ecosystem modeling, may shed light on marine ecosystem structure and functioning. A EuroMarine foresight workshop on the “Impact of climate change on the distribution of plankton functional and phylogenetic diversity” (PlankDiv) identified five grand challenges for future plankton diversity and macroecology research: (1) What can we learn about plankton communities from the new wealth of high-throughput “omics” data? (2) What is the link between plankton diversity and ecosystem function? (3) How can species distribution models be adapted to... |
| Tipo: Text |
Palavras-chave: Plankton; Macroecology; Species distribution; Functional diversity; Climate change; Habitat modeling. |
| Ano: 2017 |
URL: https://archimer.ifremer.fr/doc/00625/73739/74755.pdf |
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| Mouillot, D; Spatharis, S; Reizopoulou, S; Laugier, Thierry; Sabetta, L; Basset, A; Chi, T. |
| 1. Transitional waters, described as critical transition zones because of their position at terrestrial, freshwater and marine interfaces, provide essential goods and services to the biosphere including human populations. These ecotones face increasing human influence mainly due to population density increase in coastal areas. 2. Transitional water bodies have, to date, received little attention in the development of ecological status indicators, this is a critical deficiency when trying to meet the Water Framework Directive objective of all significant water bodies achieving good ecological status by the year 2015. 3. In order to assess changes in transitional water communities many taxonomic-based indicators have already been proposed but there are a... |
| Tipo: Text |
Palavras-chave: Biotic descriptors; Productivity; Functional diversity; Functional traits; Body size; Water Framework Directive WFD. |
| Ano: 2006 |
URL: http://archimer.ifremer.fr/doc/2006/publication-1849.pdf |
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| Jeanbille, Mathilde; Gury, Jérôme; Duran, Robert; Tronczynski, Jacek; Ghiglione, Jean-françois; Agogué, Hélène; Saïd, Olfa Ben; Taïb, Najwa; Debroas, Didier; Garnier, Cédric; Auguet, Jean-christophe. |
| Benthic microorganisms are key players in the recycling of organic matter and recalcitrant compounds such as polyaromatic hydrocarbons (PAHs) in coastal sediments. Despite their ecological importance, the response of microbial communities to chronic PAH pollution, one of the major threats to coastal ecosystems, has received very little attention. In one of the largest surveys performed so far on coastal sediments, the diversity and composition of microbial communities inhabiting both chronically contaminated and non-contaminated coastal sediments were investigated using high-throughput sequencing on the 18S and 16S rRNA genes. Prokaryotic alpha-diversity showed significant association with salinity, temperature, and organic carbon content. The effect of... |
| Tipo: Text |
Palavras-chave: Microbial communities; PAH; Chronic contamination; Coastal sediment; Functional diversity. |
| Ano: 2016 |
URL: http://archimer.ifremer.fr/doc/00347/45854/45522.pdf |
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| Brind'Amour, Anik; Rouyer, Armelle; Martin, Jocelyne. |
| The development of ecosystem-based indicators requires the broadening of a view of the community, from fish species to all the species (macrobenthic and fish) correctly captured by a given sampling gear. Many scientific surveys already have such integrated databases. The present note aims to demonstrate that existing databases, herein from dedicated coastal nursery surveys, are actually underexploited. Such databases contain information on non-commercial taxa, which could greatly improve our knowledge on the organisation and functioning of coastal ecosystems. Using two datasets, a "complete" dataset composed of commercial and not-commercial epibenthic trawled species (fish and invertebrate) and a "subset" dataset characterized by commercial and routinely... |
| Tipo: Text |
Palavras-chave: Nursery grounds; Functional diversity; Fish community; Coastal surveys; Beam trawl; Bay of Biscay. |
| Ano: 2009 |
URL: http://archimer.ifremer.fr/doc/2009/publication-6507.pdf |
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| Koeck, Barbara; Tessier, Anne; Brind'Amour, Anik; Pastor, Jeremy; Bijaoui, Benjamin; Dalias, Nicolas; Astruch, Patrick; Saragoni, Gilles; Lenfant, Philippe. |
| In the context of growing anthropogenic disturbances that deeply alter marine coastal ecosystems, various management tools are used to protect biodiversity, such as fishing gear limitations, fishing quotas, protected areas or the creation of artificial reefs (ARs). In contrast to the other management tools, ARs require a modification of natural habitats. We used underwater visual censuses to investigate the effect of habitat modification on the structure of fish communities by comparing a natural reef (NR) to ARs with different habitat complexity. Different fish assemblage descriptors were used to assess species- and functional- and community-level aspects of the assemblages. ARs were rapidly colonized by adult fishes and presented community compositions... |
| Tipo: Text |
Palavras-chave: Ecological niche; Fish community; Fisheries management; Functional diversity; Gulf of Lion; Habitat complexity; Mediterranean Sea; Underwater visual census. |
| Ano: 2014 |
URL: https://archimer.ifremer.fr/doc/00189/30029/28514.pdf |
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| Chao, Anne; Chiu, Chun-huo; Villéger, Sébastien; Sun, I-fang; Thorn, Simon; Lin, Yi-ching; Chiang, Jyh-min; Sherwin, William B.. |
| Based on the framework of attribute diversity (a generalization of Hill numbers of order q), we develop a class of functional diversity measures sensitive not only to species abundances but also to trait‐based species‐pairwise functional distances. The new method refines and improves on the conventional species‐equivalent approach in three areas: (1) the conventional method often gives similar values (close to unity) to assemblages with contrasting levels of functional diversity; (2) when a distance metric is unbounded, the conventional functional diversity depends on the presence/absence of other assemblages in the study; (3) in partitioning functional gamma diversity into alpha and beta components, the conventional gamma is sometimes less than alpha. To... |
| Tipo: Text |
Palavras-chave: Attribute diversity; Diversity decomposition; Functional (dis)similarity; Functional beta diversity; Functional diversity; Hill numbers; Quadratic entropy; Species diversity; Species traits; Trait diversity. |
| Ano: 2019 |
URL: https://archimer.ifremer.fr/doc/00489/60082/63408.pdf |
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| Wasof, Safaa; Lenoir, Jonathan; Hattab, Tarek; Jamoneau, Aurelien; Gallet-moron, Emilie; Ampoorter, Evy; Saguez, Robert; Bennsadek, Lamine; Bertrand, Romain; Valdes, Alicia; Verheyen, Kris; Decocq, Guillaume. |
| Questions How does plant community diversity influence variation in plant biomass? There are two competing hypotheses: the ‘biomass‐ratio hypothesis’, where biomass is influenced by the abundance and traits of the most dominant species, and the ‘diversity hypothesis’, where the diversity of organisms influences biomass through mechanisms such as niche complementarity. However, no studies have tested which one of these two hypotheses better explains the variation in plant biomass in the forest understorey. Location Temperate deciduous forests in Northern France. Methods For the forest understorey, we assessed species diversity and biomass as well as soil and light conditions in 133 forest plots of 100m² each. Using mixed‐effect models and after controlling... |
| Tipo: Text |
Palavras-chave: Biodiversity; Biomass; Biomass ratio hypothesis; Forest understorey; Functional diversity; Ivy; Phylogeny; Production. |
| Ano: 2018 |
URL: https://archimer.ifremer.fr/doc/00433/54441/55799.pdf |
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| Matos, Gabriel Machado; Schmitt, Paulina; Barreto, Caire; Farias, Natanael Dantas; Toledo-silva, Guilherme; Guzman, Fanny; Destoumieux Garzon, Delphine; Perazzolo, Luciane Maria; Rosa, Rafael Diego. |
| Anti-lipopolysaccharide factors (ALFs) are antimicrobial peptides with a central β-hairpin structure able to bind to microbial components. Mining sequence databases for ALFs allowed us to show the remarkable diversity of ALF sequences in shrimp. We found at least seven members of the ALF family (Groups A to G), including two novel Groups (F and G), all of which are encoded by different loci with conserved gene organization. Phylogenetic analyses revealed that gene expansion and subsequent diversification of the ALF family occurred in crustaceans before shrimp speciation occurred. The transcriptional profile of ALFs was compared in terms of tissue distribution, response to two pathogens and during shrimp development in Litopenaeus vannamei, the most... |
| Tipo: Text |
Palavras-chave: Host defense peptide; Antimicrobial peptide; Anti-LPS factor; Hostmicrobe relationship; Functional diversity; Invertebrate immunity; Crustacean; Antimicrobial activity. |
| Ano: 2018 |
URL: https://archimer.ifremer.fr/doc/00464/57523/59711.pdf |
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| Boyé, Aurelien; Thiébaut, Éric; Grall, Jacques; Legendre, Pierre; Broudin, Caroline; Houbin, Céline; Le Garrec, Vincent; Maguer, Marion; Droual, Gabin; Gauthier, Olivier. |
| Aim β diversity and its linkages with ecosystem functioning remain poorly documented. This impedes our capacity to predict biodiversity changes and how they affect ecosystem functioning at scales relevant for conservation. Here, we address the functional implications of ongoing seafloor changes by characterizing at regional scale the taxonomic and functional α and β diversities of benthic habitats currently threatened by biotic homogenization. Location Western Europe. Methods Combining a trait‐based approach to benthic community monitoring data covering a 7‐year period and 500 km of coast, we explored the mechanisms governing community assembly in habitats associated with two types of foundation species, intertidal seagrass and subtidal maerl beds,... |
| Tipo: Text |
Palavras-chave: Beta diversity; Biotic homogenization; Broad-scale monitoring; Community assembly; Coralline algae; Ecosystem engineers; Functional diversity; Zostera marina. |
| Ano: 2019 |
URL: https://archimer.ifremer.fr/doc/00515/62688/67074.pdf |
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| Hadj-hammou, Jeneen; Mouillot, David; Graham, Nicholas A. J.. |
| The response-and-effect framework is a trait-based approach that seeks to break down the mechanistic links between ecosystem disturbances, species' traits, and ecosystem processes. We apply this framework to a review of the literature on coral reef fish traits, in order to illustrate the research landscape and structure a path forward for the field. Traits were categorized into five broad groupings: behavioral, life history, morphological, diet, and physiological. Overall, there are fewer studies linking effect traits to ecosystem processes (number of papers on herbivory, n = 14; predation, n = 12; bioerosion, n = 2; nutrient cycling, n = 0) than there are linking response traits to disturbances (climate change, n = 26; fishing, n = 20; pollution, n = 4).... |
| Tipo: Text |
Palavras-chave: Ecosystem processes; Environmental disturbances; Functional diversity; Coral reef ecology; Ecosystem function; Trait-based ecology; Systematic review. |
| Ano: 2021 |
URL: https://archimer.ifremer.fr/doc/00688/79975/82919.pdf |
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| Escalas, Arthur; Hale, Lauren; Voordeckers, James W.; Yang, Yunfeng; Firestone, Mary K.; Alvarez‐cohen, Lisa; Zhou, Jizhong. |
| Functional diversity is increasingly recognized by microbial ecologists as the essential link between biodiversity patterns and ecosystem functioning, determining the trophic relationships and interactions between microorganisms, their participation in biogeochemical cycles, and their responses to environmental changes. Consequently, its definition and quantification have practical and theoretical implications. In this opinion paper, we present a synthesis on the concept of microbial functional diversity from its definition to its application. Initially, we revisit to the original definition of functional diversity, highlighting two fundamental aspects, the ecological unit under study and the functional traits used to characterize it. Then, we discuss how... |
| Tipo: Text |
Palavras-chave: Functional diversity; Functional traits; Microbial communities; Theoretical frameworks of diversity; Trait-based ecology. |
| Ano: 2019 |
URL: https://archimer.ifremer.fr/doc/00584/69631/67487.pdf |
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| Registros recuperados: 31 | |
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